Sequence Similarity Clusters for the Entities in PDB 1QO0

Entity #1 | Chains: A,B
AMIC protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 35629
95 % 2 3 23662 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 3 21212
70 % 2 3 18218
50 % 2 3 17391
40 % 2 3 17708
30 % 2 3 14468
Entity #2 | Chains: D,E
AMIR protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36511
95 % 1 1 30067 Flexibility: Medium
Max RMSD: 3.4, Avg RMSD: 3.4
PDBFlex
90 % 1 1 28928
70 % 1 1 30117
50 % 1 1 22965
40 % 1 1 20972
30 % 1 1 18774

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures