Sequence Similarity Clusters for the Entities in PDB 1Q3B

Entity #1 | Chains: A
Endonuclease VIII protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 50250
95 % 5 9 8300 Flexibility: Medium
Max RMSD: 8.9, Avg RMSD: 4.2
PDBFlex
90 % 5 9 8248
70 % 5 9 8007
50 % 5 9 7539
40 % 5 9 7254
30 % 5 9 6799

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1K3X 3 A Endonuclease VIII 562 3.2.2 | Details
2 2EA0 3 A Endonuclease VIII 562 3.2.2 | Details 4.2.99.18 | Details
3 1K3W 3 A Endonuclease VIII 562 3.2.2 | Details
4 2OPF 3 A Endonuclease VIII 562 3.2.2 | Details 4.2.99.18 | Details
5 1Q3B 1 A Endonuclease VIII 562 3.2.2 | Details
6 6FBU 1 A Endonuclease 8 562 3.2.2 | Details 4.2.99.18 | Details
7 1Q3C 1 A Endonuclease VIII 562 3.2.2 | Details
8 1Q39 1 A Endonuclease VIII 562 3.2.2 | Details
9 2OQ4 3 A, B Endonuclease VIII 562 3.2.2 | Details 4.2.99.18 | Details