Sequence Similarity Clusters for the Entities in PDB 1PTU

Entity #1 | Chains: A
PROTEIN TYROSINE PHOSPHATASE 1B protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 50172
95 % 258 271 138 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.8
PDBFlex
90 % 258 271 144
70 % 259 273 158
50 % 259 274 180
40 % 259 274 196
30 % 259 274 204
Entity #2 | Chains: B
PHOSPHOTYROSINE-CONTAINING HEXA-PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures