Sequence Similarity Clusters for the Entities in PDB 1PQ1

Entity #1 | Chains: A
Apoptosis regulator Bcl-X protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 12448
95 % 3 29 1844 Flexibility: Medium
Max RMSD: 22.5, Avg RMSD: 6.2
PDBFlex
90 % 3 30 1370
70 % 3 30 1414
50 % 3 30 1438
40 % 3 30 1474
30 % 3 30 1512
Entity #2 | Chains: B
BCL2-like protein 11 protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 81888
95 % 1 1 48647
90 % 1 1 54154
70 % 1 1 47237
50 % 1 1 40754
40 % 1 1 36790
30 % 1 1 32387

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures