Sequence Similarity Clusters for the Entities in PDB 1POI

Entity #1 | Chains: A,C
GLUTACONATE COENZYME A-TRANSFERASE protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50592
95 % 1 1 33455 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 32819
70 % 1 1 28793
50 % 1 1 25705
40 % 1 1 23446
30 % 1 1 20476
Entity #2 | Chains: B,D
GLUTACONATE COENZYME A-TRANSFERASE protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50593
95 % 1 1 33456 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32071
70 % 1 1 28794
50 % 1 1 25180
40 % 1 1 22973
30 % 1 1 20477

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures