Sequence Similarity Clusters for the Entities in PDB 1P0S

Entity #1 | Chains: L
Coagulation factor X precursor protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 39 1301
95 % 40 40 1695 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 40 40 1720
70 % 40 40 1724
50 % 68 74 914
40 % 68 74 946
30 % 73 79 920
Entity #2 | Chains: H
Coagulation factor X precursor protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 111 119 302
95 % 126 136 311 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 126 136 324
70 % 126 137 365
50 % 126 137 435
40 % 267 290 186
30 % 1803 1949 6
Entity #3 | Chains: E
Ecotin precursor protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 22953
95 % 16 18 2452 Flexibility: Low
Max RMSD: 9.8, Avg RMSD: 1.6
PDBFlex
90 % 16 18 2489
70 % 16 19 2165
50 % 16 19 2222
40 % 16 19 2257
30 % 16 19 2259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures