Sequence Similarity Clusters for the Entities in PDB 1OXD

Entity #1 | Chains: A
cyan fluorescent protein cfp protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36285
95 % 28 288 71 Flexibility: Low
Max RMSD: 22.5, Avg RMSD: 1.0
PDBFlex
90 % 31 333 36
70 % 31 340 41
50 % 31 341 74
40 % 31 342 86
30 % 31 342 89

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures