Sequence Similarity Clusters for the Entities in PDB 1OTJ

Entity #1 | Chains: A,B,C,D
Alpha-Ketoglutarate-Dependent Taurine Dioxygenase protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 4988
95 % 2 5 5957 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 2 5 5863
70 % 2 5 5912
50 % 3 8 2915
40 % 3 8 2922
30 % 12 32 700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures