Sequence Similarity Clusters for the Entities in PDB 1OHH

Entity #1 | Chains: A,B,C
ATP synthase subunit alpha, mitochondrial protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 29 451
95 % 17 43 302 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 17 43 317
70 % 20 63 175
50 % 20 114 124
40 % 20 114 144
30 % 20 114 147
Entity #2 | Chains: D,E,F
ATP synthase subunit beta, mitochondrial protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 39 292
95 % 18 42 366 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 18 42 379
70 % 25 85 138
50 % 21 65 204
40 % 21 65 223
30 % 21 65 233
Entity #3 | Chains: G
ATP synthase subunit gamma, mitochondrial protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 39 1128
95 % 16 42 1334 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.3
PDBFlex
90 % 16 42 1361
70 % 17 44 1349
50 % 17 44 1360
40 % 20 62 797
30 % 22 76 677
Entity #4 | Chains: H
ATPase inhibitor, mitochondrial protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 82543
95 % 2 2 18050 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.8
PDBFlex
90 % 2 2 17707
70 % 2 5 7550
50 % 2 5 7107
40 % 2 5 6879
30 % 2 5 6452

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures