Sequence Similarity Clusters for the Entities in PDB 1OF5

Entity #1 | Chains: A
MRNA EXPORT FACTOR MEX67 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66431
95 % 1 1 52765
90 % 1 1 50320
70 % 1 1 43601
50 % 1 1 37720
40 % 2 2 20678
30 % 2 2 18542
Entity #2 | Chains: B
MRNA TRANSPORT REGULATOR MTR2 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18922
95 % 1 2 17750 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 18124
70 % 1 2 16233
50 % 1 2 14652
40 % 1 2 13636
30 % 1 2 12397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures