Sequence Similarity Clusters for the Entities in PDB 1O5E

Entity #1 | Chains: L
Serine protease hepsin protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 32419
95 % 2 3 26907 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 3 26220
70 % 2 3 24601
50 % 2 3 21210
40 % 2 3 19058
30 % 2 3 17736
Entity #2 | Chains: H
Serine protease hepsin protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30799
95 % 2 3 28204 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 3 27222
70 % 2 3 24194
50 % 2 3 20144
40 % 472 896 10
30 % 818 1923 5

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures