Sequence Similarity Clusters for the Entities in PDB 1O1D

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 12 791
95 % 9 15 986
90 % 9 15 1024
70 % 13 19 922
50 % 45 51 527
40 % 90 99 395
30 % 122 131 280
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 819
95 % 8 14 1017
90 % 9 16 1015
70 % 11 18 982
50 % 12 19 971
40 % 322 351 69
30 % 323 352 73
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 12 800
95 % 9 15 1006
90 % 9 15 1043
70 % 18 25 750
50 % 18 25 790
40 % 323 351 69
30 % 324 352 73
Entity #4 | Chains: 0,1,2,3,4,5,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 151 157 7
95 % 162 168 14
90 % 213 219 9
70 % 238 244 13
50 % 245 251 16
40 % 265 271 22
30 % 286 292 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures