Sequence Similarity Clusters for the Entities in PDB 1O18

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 803
95 % 13 15 1000
90 % 13 15 1040
70 % 17 19 941
50 % 50 52 530
40 % 95 100 399
30 % 130 135 262
Entity #2 | Chains: E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 821
95 % 12 14 1022
90 % 13 16 1032
70 % 15 18 995
50 % 16 19 991
40 % 330 351 69
30 % 331 352 73
Entity #3 | Chains: F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 813
95 % 13 15 1019
90 % 13 15 1055
70 % 14 16 1063
50 % 22 25 805
40 % 331 351 69
30 % 332 352 73
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 155 157 7
95 % 166 168 14
90 % 218 220 9
70 % 243 245 13
50 % 250 252 16
40 % 270 272 23
30 % 291 293 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures