Sequence Similarity Clusters for the Entities in PDB 1NXK

Entity #1 | Chains: A,B,C,D
MAP kinase-activated protein kinase 2 protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 8135
95 % 1 4 8188 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.4
PDBFlex
90 % 1 4 8113
70 % 1 4 7860
50 % 1 4 7213
40 % 1 4 6664
30 % 1 4 5821

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures