Sequence Similarity Clusters for the Entities in PDB 1NVU

Entity #1 | Chains: Q,R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 15203
95 % 127 188 206 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.8
PDBFlex
90 % 129 175 120
70 % 246 349 45
50 % 271 393 65
40 % 271 393 81
30 % 378 644 18
Entity #2 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 53 882
95 % 25 53 1211 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.3
PDBFlex
90 % 25 53 1246
70 % 25 54 1260
50 % 25 54 1291
40 % 25 54 1344
30 % 25 54 1373

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures