Sequence Similarity Clusters for the Entities in PDB 1NOC

Entity #1 | Chains: A
INDUCIBLE NITRIC OXIDE SYNTHASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 7378
95 % 10 11 7985 Flexibility: Low
Max RMSD: 7.2, Avg RMSD: 1.3
PDBFlex
90 % 10 11 7938
70 % 33 56 529
50 % 521 548 10
40 % 521 548 12
30 % 521 548 18
Entity #2 | Chains: B
TYPE 1 CHLORAMPHENICOL ACETYLTRANSFERASE protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 925
95 % 3 5 1252 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 5 1291
70 % 3 5 1316
50 % 3 5 1340
40 % 9 11 1219
30 % 9 11 1269

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures