Sequence Similarity Clusters for the Entities in PDB 1NAE

Entity #1 | Chains: A
putative xylanase protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 33623
95 % 3 3 28006 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 3 27006
70 % 3 3 24501
50 % 3 3 21544
40 % 3 3 19701
30 % 5 6 10891

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OD3 1 A PUTATIVE XYLANASE CARBOHYDRATE-BINDING DOMAIN, RESIDUES 285-417 1510 3.2.1.8 | Details
2 1O8S 1 A PUTATIVE ENDO-XYLANASE CARBOHYDRATE-BINDING DOMAIN, RESIDUES 273-417 1510 3.2.1.8 | Details
3 4QB6 1 A Xyn30D 198119 3.2.1.8 | Details
4 4QB2 1 A Xyn30D unp residues 422-562 198119 3.2.1.8 | Details
5 1NAE 1 A putative xylanase C-terminal carbohydrate-binding module 1510 3.2.1.8 | Details
6 4QB1 1 A Xyn30D unp residues 422-562 198119 3.2.1.8 | Details