Sequence Similarity Clusters for the Entities in PDB 1N2Z

Entity #1 | Chains: A,B
Vitamin B12 transport protein btuF protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16771
95 % 1 6 8707 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 1 6 9120
70 % 1 6 8389
50 % 1 6 7875
40 % 1 6 7568
30 % 2 7 6566

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5YSC 1 A Vitamin B12-binding protein 666
2 1N2Z 1 A, B Vitamin B12 transport protein btuF 562
3 1N4A 1 A, B Vitamin B12 transport protein btuF 562
4 2QI9 3 F Vitamin B12-binding protein btuF 562
5 1N4D 1 A, B Vitamin B12 transport protein btuF 562
6 4DBL 3 E, J Vitamin B12-binding protein 562
7 4FI3 3 F Vitamin B12-binding protein UNP residues 22-266 562