Sequence Similarity Clusters for the Entities in PDB 1MXE

Entity #1 | Chains: A,B
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 13 3855
95 % 25 232 72 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.8
PDBFlex
90 % 26 239 76
70 % 32 245 84
50 % 32 254 101
40 % 33 365 56
30 % 33 366 58
Entity #2 | Chains: E,F
Target Sequence of rat Calmodulin-Dependent Protein Kinase I protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60498
95 % 1 1 45055 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 42813
70 % 1 1 37372
50 % 1 1 32617
40 % 1 1 27751
30 % 1 1 26122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures