Sequence Similarity Clusters for the Entities in PDB 1MVW

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 791
95 % 14 15 986
90 % 14 15 1024
70 % 18 19 922
50 % 50 51 527
40 % 95 99 395
30 % 127 131 280
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY; LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 11 819
95 % 13 14 1017
90 % 14 16 1015
70 % 16 18 982
50 % 17 19 971
40 % 332 351 69
30 % 333 352 73
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL; LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 800
95 % 14 15 1006
90 % 14 15 1043
70 % 23 25 750
50 % 23 25 790
40 % 333 351 69
30 % 334 352 73
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
RABBIT SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 156 157 7
95 % 167 168 14
90 % 218 219 9
70 % 243 244 13
50 % 250 251 16
40 % 270 271 22
30 % 291 292 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures