Sequence Similarity Clusters for the Entities in PDB 1MOX

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11354
95 % 1 3 11446 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 2.7
PDBFlex
90 % 1 3 11330
70 % 1 3 10589
50 % 1 3 9747
40 % 3 8 5312
30 % 3 8 5074
Entity #2 | Chains: C,D
Transforming Growth Factor alpha protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 8709
95 % 2 7 9245 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 7 9561
70 % 2 7 8918
50 % 2 9 7310
40 % 2 9 6792
30 % 2 9 6619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures