Sequence Similarity Clusters for the Entities in PDB 1MKI

Entity #1 | Chains: A,B
Probable Glutaminase ybgJ protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9861
95 % 1 4 10275 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.9
PDBFlex
90 % 1 4 10195
70 % 1 4 9839
50 % 1 4 9130
40 % 3 6 4730
30 % 3 6 4574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures