Sequence Similarity Clusters for the Entities in PDB 1M9P

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 147 219 43
95 % 177 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 178 257 44
70 % 219 340 22
50 % 485 735 7
40 % 485 735 8
30 % 525 783 11
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7926
95 % 185 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 188 262 40
70 % 228 333 21
50 % 486 735 7
40 % 486 735 8
30 % 526 783 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2W72 2 B, D HUMAN HEMOGLOBIN A CHAIN BETA, RESIDUES 2-147 9606
2 1IRD 2 B Hemoglobin beta chain 9606
3 2DN2 2 B, D Hemoglobin beta subunit 9606
4 2DN3 2 B Hemoglobin beta subunit 9606
5 2DN1 2 B Hemoglobin beta subunit 9606
6 1J41 2 B, D, F, H Hemoglobin beta Chain 9606
7 1J40 2 B, D, F, H Hemoglobin beta Chain 9606
8 1BAB 2 B, D HEMOGLOBIN THIONVILLE (DEOXY) (BETA CHAIN) 9606
9 3S66 2 B Hemoglobin subunit beta 9606
10 2D5Z 2 B, D Hemoglobin beta subunit 9606
11 1BZ0 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
12 1UIW 2 B, D, F, H Hemoglobin beta chain 9606
13 1J3Y 2 B, D, F, H Hemoglobin beta Chain 9606
14 6HK2 2 B, D Hemoglobin subunit beta 9606
15 3QJD 2 B, D Hemoglobin subunit beta 9606
16 1THB 2 B, D HEMOGLOBIN A (DEOXY) (BETA CHAIN) 9606
17 1BZZ 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
18 5WOG 2 C, D Hemoglobin subunit beta 9606
19 1J3Z 2 B, D, F, H Hemoglobin beta Chain 9606
20 1BZ1 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
21 3NMM 2 B, D Hemoglobin subunit beta 9606
22 5WOH 2 B, D Hemoglobin subunit beta 9606
23 4HHB 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
24 1J7Y 2 B, D Hemoglobin beta chain 9606
25 1DXV 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
26 1DXT 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
27 1DXU 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
28 6BWP 2 B, D Hemoglobin subunit beta 9606
29 3DUT 2 B, D Hemoglobin subunit beta 9606
30 1SDK 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
31 2HHB 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
32 1QSH 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
33 4ROL 2 B, D Hemoglobin subunit beta 9606
34 1SDL 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
35 1BBB 2 B, D HEMOGLOBIN A (CARBONMONOXY) (BETA CHAIN) 9606
36 1QSI 2 B, D PROTEIN (HEMOGLOBIN BETA CHAIN) 9606
37 1CBM 1 A, B, C, D HEMOGLOBIN BETA 4 (CARBONMONOXY) 9606
38 4MQG 2 B Hemoglobin subunit beta 9606
39 2D60 2 B, D Hemoglobin beta subunit 9606
40 2W6V 2 B, D HEMOGLOBIN SUBUNIT BETA CHAIN BETA, RESIDUES 2-147 9606
41 1GBU 2 B, D HEMOGLOBIN DEOXY 9606
42 1NQP 2 B, D Hemoglobin beta chain 9606
43 1QI8 2 B, D HEMOGLOBIN BETA CHAIN 9606
44 1A01 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
45 1A3N 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
46 3QJB 2 B Hemoglobin subunit beta 9606
47 1C7C 2 B, D PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)) 9606
48 5E83 2 B, D Hemoglobin subunit beta 9606
49 1YE2 2 B, D Hemoglobin beta chain 9606
50 1A3O 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
51 1O1O 2 B, D Hemoglobin beta chain 9606
52 5KSI 2 B, D Hemoglobin subunit beta 9606
53 5E6E 2 B Hemoglobin subunit beta 9606
54 3HHB 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
55 1R1Y 2 B, D Hemoglobin beta chain 9606
56 1K0Y 2 B, D hemoglobin beta chain 9606
57 1YVQ 2 B, D Hemoglobin beta chain 9606
58 5UCU 2 B Hemoglobin subunit beta 9606
59 1C7D 2 B, D PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)) 9606
60 1O1P 2 B, D Hemoglobin beta chain 9606
61 1O1J 2 B, D Hemoglobin Beta chain 9606
62 1C7B 2 B, D PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)) 9606
63 1O1N 2 B, D Hemoglobin beta chain 9606
64 3NL7 2 B Hemoglobin subunit beta 9606
65 1CBL 1 A, B, C, D HEMOGLOBIN BETA 4 (DEOXY) 9606
66 1Y4V 2 B, D Hemoglobin beta chain 9606
67 5URC 2 B, D Hemoglobin subunit beta 9606
68 1G9V 2 B, D HEMOGLOBIN BETA CHAIN 9606
69 1YVT 2 B Hemoglobin beta chain 9606
70 1CLS 2 B, D HEMOGLOBIN CROSS-LINKED DEOXY FORM 9606
71 1VWT 2 B, D HEMOGLOBIN ALPHA AQUOMET, BETA DEOXY 9606
72 1QXE 2 B, D Hemoglobin beta chain beta chain 9606
73 1RQ3 2 B, D Hemoglobin beta chain 9606
74 1XZ2 2 B, D Hemoglobin beta chain 9606
75 3QJE 2 B, D Hemoglobin subunit beta 9606
76 4L7Y 2 B, D Hemoglobin subunit beta 9606
77 5SW7 2 B Hemoglobin subunit beta 9606
78 1O1L 2 B, D Hemoglobin Beta chain 9606
79 1XZ7 2 B, D Hemoglobin beta chain 9606
80 3D7O 2 B Hemoglobin subunit beta 9606
81 3IC0 2 B, D Hemoglobin subunit beta 9606
82 1O1M 2 B, D Hemoglobin Beta chain 9606
83 1BUW 2 B, D PROTEIN (HEMOGLOBIN) THE SULFHYDRYL GROUPS OF CYSTEINE 93 OF BETA SUBUNITS ARE S-NITROSYLATED. THE HEME GROUPS ARE NITROSYLATED. 9606
84 1XXT 2 B, D Hemoglobin beta chain 9606
85 1HBB 2 B, D HEMOGLOBIN A (DEOXY) (BETA CHAIN) 9606
86 1KD2 2 B, D Hemoglobin beta chain 9606
87 1ABW 2 B, D HEMOGLOBIN-BASED BLOOD SUBSTITUTE 9606
88 5E29 2 B, D Hemoglobin subunit beta 9606
89 3WHM 2 B, F Hemoglobin subunit beta 9606
90 1A0Z 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
91 6DI4 2 B, D Hemoglobin subunit beta 9606
92 1Y83 2 B, D Hemoglobin beta chain 9606
93 1A00 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
94 1Y7Z 2 B, D Hemoglobin beta chain 9606
95 4N8T 2 B Hemoglobin subunit beta 9606
96 2HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY), BETA CHAIN 9606
97 1Y7D 2 B, D Hemoglobin beta chain 9606
98 1Y4G 2 B, D Hemoglobin beta chain 9606
99 4MQI 2 B Hemoglobin subunit beta 9606
100 1Y45 2 B, D Hemoglobin beta chain 9606
101 4NI1 2 B Hemoglobin subunit beta 9606
102 1J7W 2 B, D hemoglobin beta chain 9606
103 2HHD 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
104 1YIH 2 B, D Hemoglobin beta chain 9606
105 1K1K 2 B HEMOGLOBIN BETA CHAIN 9606
106 3OO4 2 B Hemoglobin subunit beta 9606
107 1GBV 2 B, D HEMOGLOBIN ALPHA-OXY, BETA-DEOXY, T STATE 9606
108 2HBE 2 B HEMOGLOBIN A (N-BUTYL ISOCYANIDE) (BETA CHAIN) 9606
109 1Y4F 2 B, D Hemoglobin beta chain 9606
110 1XY0 2 B, D Hemoglobin beta chain 9606
111 4ROM 2 B, D Hemoglobin subunit beta 9606
112 1XZ4 2 B, D Hemoglobin beta chain 9606
113 1Y5J 2 B, D Hemoglobin beta chain 9606
114 1Y4P 2 B, D Hemoglobin beta chain 9606
115 1Y2Z 2 B, D Hemoglobin beta chain 9606
116 6BNR 2 B, D Hemoglobin subunit beta 9606
117 4X0L 2 B Hemoglobin subunit beta 9606
118 1HDB 2 B, D HEMOGLOBIN (DEOXY) BETA-V67T ALPHA-BETA-ALPHA-BETA TETRAMER 9606
119 3W4U 2 B, D, F Hemoglobin subunit beta 9606
120 1YHE 2 B, D Hemoglobin beta chain 9606
121 5U3I 2 B, D Hemoglobin subunit beta 9606
122 1XZV 2 B, D Hemoglobin beta chain 9606
123 3S65 2 B, D Hemoglobin subunit beta 9606
124 6HBW 2 B, D PROTEIN (HEMOGLOBIN BETA) 9606
125 1Y31 2 B, D Hemoglobin beta chain 9606
126 1Y0D 2 B, D Hemoglobin beta chain 9606
127 3QJC 2 B Hemoglobin subunit beta 9606
128 1Y85 2 B, D Hemoglobin beta chain RESIDUES 1-145 9606
129 1HBA 2 B, D HEMOGLOBIN ROTHSCHILD (DEOXY) (BETA CHAIN) 9606
130 1AJ9 2 B HEMOGLOBIN (BETA CHAIN) 9606
131 2HBC 2 B HEMOGLOBIN A (ETHYL ISOCYANIDE) (BETA CHAIN) 9606
132 1Y0W 2 B, D Hemoglobin beta chain 9606
133 6BWU 2 B Hemoglobin subunit beta 9606
134 1XZ5 2 B, D Hemoglobin beta chain 9606
135 1Y0T 2 B, D Hemoglobin beta chain 9606
136 1Y4Q 2 B, D Hemoglobin beta chain 9606
137 1Y35 2 B, D Hemoglobin beta chain 9606
138 1J7S 2 B, D Hemoglobin beta chain 9606
139 1Y5F 2 B, D Hemoglobin beta chain 9606
140 3WCP 2 B, D Hemoglobin subunit beta 9606
141 1A0U 2 B, D HEMOGLOBIN (BETA CHAIN) 9606
142 1RPS 2 B, D Hemoglobin beta chain 9606
143 1Y7G 2 B, D Hemoglobin beta chain 9606
144 1Y5K 2 B, D Hemoglobin beta chain 9606
145 1Y22 2 B, D Hemoglobin beta chain 9606
146 1O1K 2 B, D Hemoglobin Beta chain 9606
147 1XZU 2 B, D Hemoglobin beta chain 9606
148 1Y09 2 B, D Hemoglobin beta chain 9606
149 1RQA 2 B, D Hemoglobin beta chain 9606
150 1Y4R 2 B, D Hemoglobin beta chain 9606
151 1GZX 2 B, D HEMOGLOBIN BETA CHAIN LIGANDED T STATE 9606
152 1Y4B 2 B, D Hemoglobin beta chain 9606
153 2HHE 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
154 2HBD 2 B HEMOGLOBIN A (METHYL ISOCYANIDE) (BETA CHAIN) 9606
155 3P5Q 2 B Hemoglobin subunit beta 9606
156 1DKE 2 B, D HEMOGLOBIN: BETA CHAIN BETA HEME CONTAINS NI+2 ION 9606
157 1HGA 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
158 1HGC 2 B, D HEMOGLOBIN (DEOXY) (BETA CHAIN) 9606
159 2HBF 2 B HEMOGLOBIN A (N-PROPYL ISOCYANIDE) (BETA CHAIN) 9606
160 1Y0A 2 B, D Hemoglobin beta chain 9606
161 1YEV 2 B, D Hemoglobin beta chain 9606
162 1YZI 2 B Hemoglobin beta chain 9606
163 3HXN 2 B, D Hemoglobin subunit beta 9606
164 5UFJ 2 B, D Hemoglobin subunit beta 9606
165 1XYE 2 B, D Hemoglobin beta chain 9606
166 1RQ4 2 B, D Hemoglobin beta chain 9606
167 6HAL 2 B, D Hemoglobin subunit beta 9606
168 2YRS 2 B, D, K, O Hemoglobin subunit beta 9606
169 5KDQ 2 B, D Hemoglobin subunit beta 9606
170 1Y7C 2 B, D Hemoglobin beta chain 9606
171 4M4B 2 B Hemoglobin subunit beta 9606
172 6FQF 1 A, B, C, D Hemoglobin subunit beta 9606
173 1HGB 2 B, D HEMOGLOBIN (AQUO MET) (BETA CHAIN) 9606
174 1YEO 2 B, D Hemoglobin beta chain 9606
175 1Y0C 2 B, D Hemoglobin beta chain 9606
176 1YEU 2 B, D Hemoglobin beta chain 9606
177 4M4A 2 B Hemoglobin subunit beta 9606
178 1O1I 2 B Hemoglobin Beta chain 9606
179 1YH9 2 B, D Hemoglobin beta chain 9606
180 1MKO 2 B, D Hemoglobin beta chain 9606
181 1Y46 2 B, D Hemoglobin beta chain 9606
182 1LJW 2 B hemoglobin beta chain 9606
183 3ONZ 2 B Hemoglobin subunit beta Hemoglobin Chain B 9606
184 1HHO 2 B HEMOGLOBIN A (OXY) (BETA CHAIN) 9606
185 1M9P 2 B, D Hemoglobin beta chain 9606
186 1BIJ 2 B, D HEMOGLOBIN A LYS B82/D82 CROSSLINKED HEMOGLOBIN 9606
187 1HAB 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
188 1R1X 2 B Hemoglobin beta chain 9606
189 3R5I 2 B, D Hemoglobin subunit beta 9606
190 3OO5 2 B Hemoglobin subunit beta 9606
191 1NEJ 2 B, D Hemoglobin beta chain beta chain 9606
192 4MQC 2 B Hemoglobin subunit beta 9606
193 4NI0 2 B Hemoglobin subunit beta 9606
194 1RVW 2 B HEMOGLOBIN CARBONMONXY HEMES 9606
195 1YIE 2 B, D Hemoglobin beta chain 9606
196 1B86 2 B, D PROTEIN (HEMOGLOBIN; BETA CHAIN) 2,3-DIPHOSPHOGLYCERATE COMPLEX 9606
197 5EE4 3 D, F Hemoglobin subunit beta 9606
198 1HAC 2 B, D HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
199 6BB5 2 B Hemoglobin subunit beta 9606
200 5HY8 2 B, D, F, H, T Hemoglobin subunit beta 9606
201 1QXD 2 B, D Hemoglobin beta chain beta chain 9606
202 4FC3 2 B Hemoglobin subunit beta 9606
203 1ABY 2 B, D HEMOGLOBIN 9606
204 1YE0 2 B, D Hemoglobin beta chain 9606
205 3IC2 2 B, D Hemoglobin subunit beta 9606
206 4MQH 2 B Hemoglobin subunit beta 9606
207 1YHR 2 B, D Hemoglobin beta chain 9606
208 5KSJ 2 B, D Hemoglobin subunit beta 9606
209 1YFF 2 B, D, F, H Hemoglobin beta chain 9606
210 1LFQ 2 B Hemoglobin beta chain 9606
211 1LFT 2 B Hemoglobin beta chain 9606
212 3B75 2 B, D, F, H, T Hemoglobin subunit beta 9606
213 1YGF 2 B, D Hemoglobin beta chain 9606
214 1YG5 2 B, D Hemoglobin beta chain 9606
215 1LFL 2 B, D, Q, S Hemoglobin beta chain 9606
216 1YDZ 2 B, D Hemoglobin beta chain 9606
217 1YEN 2 B, D Hemoglobin beta chain 9606
218 5X2S 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
219 1NIH 2 B, D HEMOGLOBIN (FERROUS CARBONMONOXY) (BETA CHAIN) 9606
220 1YGD 2 B, D Hemoglobin beta chain 9606
221 5X2U 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
222 1YEQ 2 B, D Hemoglobin beta chain 9606
223 1FN3 2 B, D HEMOGLOBIN BETA CHAIN 9606
224 1Y8W 2 B, D Hemoglobin beta chain 9606
225 5HU6 2 B Hemoglobin subunit beta 9606
226 1LFV 2 B Hemoglobin beta chain 9606
227 5X2T 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
228 4N7O 2 B, D, F, H, J, L Hemoglobin subunit beta UNP residues 2-147 9606
229 4XS0 2 B Hemoglobin subunit beta 9606
230 1LFZ 2 B Hemoglobin beta chain 9606
231 4N7N 2 B, D, F, H, J, L Hemoglobin subunit beta UNP residues 2-147 9606
232 1JY7 2 B, D, Q, S, V, X Hemoglobin beta chain 9606
233 5JDO 4 D Hemoglobin subunit beta 9606
234 5JDO 6 F Hemoglobin subunit beta 9606
235 5X2R 2 B, D, F, H, J, L Hemoglobin subunit beta 9606
236 3D17 2 B, D Hemoglobin subunit beta 9606
237 4N7P 2 B, D, F, H, J, L Hemoglobin subunit beta UNP residues 2-147 9606
238 1LFY 2 B Hemoglobin beta chain 9606
239 3SZK 2 B, E Hemoglobin subunit beta 9606
240 1HBS 2 B, D, F, H HEMOGLOBIN S (DEOXY) (BETA CHAIN) 9606
241 4WJG 2 1, B, G, L, Q, V Hemoglobin subunit beta 9606
242 1CMY 2 B, D HEMOGLOBIN YPSILANTI (CARBONMONOXY) (BETA CHAIN) 9606
243 3ODQ 2 B, D Hemoglobin subunit beta 9606
244 5VMM 2 B, D Hemoglobin subunit beta 9606
245 4IJ2 2 B, D Hemoglobin subunit beta 9606
246 1YE1 2 B, D Hemoglobin beta chain 9606
247 6NBC 2 B, D Hemoglobin subunit beta 9606
248 6NBD 2 B, D Hemoglobin subunit beta 9606
249 5NI1 2 B, D Hemoglobin subunit beta 9606
250 2M6Z 2 B, D Hemoglobin subunit beta 9606
251 3KMF 2 C, G Hemoglobin subunit beta 9606
252 2DXM 2 B, D Hemoglobin subunit beta 9606
253 2H35 2 B, D Hemoglobin beta subunit 9606
254 1GLI 2 B, D DEOXYHEMOGLOBIN 9606
255 1COH 2 B, D HEMOGLOBIN (COBALTOUS DEOXY) (BETA CHAIN) 9606
256 1HCO 2 B HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN) 9606
257 2HCO 2 B HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN) 9606