Sequence Similarity Clusters for the Entities in PDB 1M2Z

Entity #1 | Chains: A,D
glucocorticoid receptor protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45020
95 % 21 25 1471 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 5.0
PDBFlex
90 % 24 28 1411
70 % 24 28 1438
50 % 54 59 641
40 % 54 59 668
30 % 54 59 701
Entity #2 | Chains: B,E
nuclear receptor coactivator 2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27827
95 % 2 2 22715 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 2 2 22066
70 % 2 2 20221
50 % 2 2 18796
40 % 2 2 16521
30 % 2 2 15546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures