Sequence Similarity Clusters for the Entities in PDB 1M1E

Entity #1 | Chains: A
Beta-catenin protein, length: 538 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 24 1611
95 % 6 24 2082 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.4
PDBFlex
90 % 6 24 2136
70 % 6 25 2059
50 % 6 25 2108
40 % 6 25 2149
30 % 7 28 1877
Entity #2 | Chains: B
ICAT protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68526
95 % 1 1 55463
90 % 1 2 32888
70 % 1 2 29475
50 % 1 2 25729
40 % 1 2 23490
30 % 1 2 20926

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures