Sequence Similarity Clusters for the Entities in PDB 1LFT

Entity #1 | Chains: A
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 170 219 43
95 % 204 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 205 257 44
70 % 255 340 22
50 % 567 735 7
40 % 567 735 7
30 % 614 783 10
Entity #2 | Chains: B
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 129 166 78
95 % 211 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 214 261 37
70 % 273 353 17
50 % 568 735 7
40 % 568 735 7
30 % 615 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures