Sequence Similarity Clusters for the Entities in PDB 1L0W

Entity #1 | Chains: A,B
Aspartyl-tRNA synthetase protein, length: 580 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 5098
95 % 2 7 6197 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 2 7 6212
70 % 2 7 5864
50 % 2 15 2543
40 % 2 16 2252
30 % 2 16 2281

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6HHX 1 A, B Aspartate--tRNA(Asp) ligase aspartyl-tRNA synthetase 274 6.1.1.12 | Details
2 1L0W 1 A, B Aspartyl-tRNA synthetase 274 6.1.1.12 | Details
3 6HHW 1 A, B Aspartate--tRNA(Asp) ligase aspartyl-tRNA synthetase 274 6.1.1.12 | Details
4 6HHV 1 A, B Aspartate--tRNA(Asp) ligase aspartyl-tRNA synthetase 274 6.1.1.12 | Details
5 6SJC 1 A, B Aspartate--tRNA(Asp) ligase aspartyl-tRNA synthetase 274 6.1.1.12 | Details
6 1G51 1 A, B ASPARTYL-TRNA SYNTHETASE 274 6.1.1.12 | Details
7 1C0A 2 A ASPARTYL TRNA SYNTHETASE 562 2.6.1.22 | Details 6.1.1.12 | Details
8 4RMF 1 A Aspartate--tRNA(Asp/Asn) ligase 1772 6.1.1.23 | Details
9 4O2D 1 A, B Aspartate--tRNA ligase 1772 6.1.1.23 | Details
10 1IL2 2 A, B ASPARTYL-TRNA SYNTHETASE 562 2.6.1.22 | Details 6.1.1.12 | Details
11 1EQR 1 A, B, C ASPARTYL-TRNA SYNTHETASE 562 2.6.1.22 | Details 6.1.1.12 | Details
12 5W25 1 A, B Aspartate--tRNA(Asp/Asn) ligase 1773 6.1.1.23 | Details
13 4WJ4 1 A Aspartate--tRNA(Asp/Asn) ligase 287 6.1.1.23 | Details
14 1EFW 2 A, B ASPARTYL-TRNA SYNTHETASE 274 6.1.1.12 | Details
15 4WJ3 4 M, N, O, P Aspartate--tRNA(Asp/Asn) ligase 287 6.1.1.23 | Details