Sequence Similarity Clusters for the Entities in PDB 1KYI

Entity #1 | Chains: A,B,C,D,E,F,S,T,U,V,W,X
ATP-dependent hsl protease ATP-binding subunit hslU protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 2221
95 % 3 4 2895 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.7
PDBFlex
90 % 3 4 2970
70 % 10 16 767
50 % 10 16 790
40 % 10 16 822
30 % 10 16 875
Entity #2 | Chains: G,H,I,J,K,L,M,N,O,P,Q,R
ATP-dependent protease hslV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 1202
95 % 5 6 1639 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 5 6 1656
70 % 13 16 649
50 % 19 23 439
40 % 19 23 463
30 % 19 23 479

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures