Sequence Similarity Clusters for the Entities in PDB 1KU1

Entity #1 | Chains: A,B
ARF guanine-nucleotide exchange factor 2 protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43908
95 % 1 1 41063 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 32687
70 % 1 2 25960
50 % 1 2 22801
40 % 1 2 20845
30 % 1 2 18674

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1KU1 1 A, B ARF guanine-nucleotide exchange factor 2 Sec7 domain (residues 570-714) 4932
2 1RE0 2 B ARF guanine-nucleotide exchange factor 1 Core Sec7 domain of Gea1 (residues 540-754) 4932