Sequence Similarity Clusters for the Entities in PDB 1KHX

Entity #1 | Chains: A
Smad2 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 85421
95 % 1 9 6141 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.0
PDBFlex
90 % 1 9 6153
70 % 1 12 3467
50 % 1 13 2778
40 % 1 13 2786
30 % 1 13 2766

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1KHX 1 A Smad2 9606
2 1MJS 1 A SMAD 3 MH2 domain, residues 229-425 9606
3 5XOD 1 A Mothers against decapentaplegic homolog 2 UNP residues 262-458 9606
4 1DEV 1 A, C MAD (mothers against decapentaplegic, Drosophila) homolog 2 SMAD2 MH2 DOMAIN 9606
5 5XOC 1 A Mothers against decapentaplegic homolog 3 UNP residues 220-416 9606
6 3GMJ 1 A, B, C, D Protein mothers against dpp MH2 domain, residues 215-455 7227
7 1KHU 1 A, B, C, D SMAD1 DWB 9606
8 1U7F 1 A, C Mothers against decapentaplegic homolog 3 MH2 and Linker domains 9606
9 1MK2 1 A SMAD 3 MH2 domain, residues 220-425 9606
10 5ZOK 1 A, C Mothers against decapentaplegic homolog 1 UNP residues 259-462 9606
11 1U7V 1 A, C Mothers against decapentaplegic homolog 2 MH2 and Linker domains 9606
12 5ZOJ 1 A, B, C Mothers against decapentaplegic homolog 2 UNP residues 262-458 9606
13 3DIT 1 A, B, C Protein mothers against dpp MAD MH2 domain 7227