Sequence Similarity Clusters for the Entities in PDB 1JSP

Entity #1 | Chains: A
tumor protein p53 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31880
95 % 1 2 26763
90 % 1 2 25844
70 % 1 2 23500
50 % 1 2 20682
40 % 1 2 18893
30 % 1 2 16931
Entity #2 | Chains: B
CREB-BINDING PROTEIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 60 413
95 % 69 69 384
90 % 69 69 403
70 % 69 69 438
50 % 69 69 482
40 % 69 69 511
30 % 69 69 535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures