1JPF

Crystal Structure Of The LCMV Peptidic Epitope Gp276 In Complex With The Murine Class I Mhc Molecule H-2Db


Sequence Similarity Clusters for the Entities in PDB 1JPF

Entity #1 | Chains: A
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 66 246
95 % 20 70 306
90 % 20 72 316
70 % 479 860 6
50 % 484 874 7
40 % 523 935 8
30 % 525 960 13
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 144 115
95 % 96 276 70
90 % 96 276 79
70 % 596 1142 4
50 % 607 1168 3
40 % 607 1168 4
30 % 607 1168 10
Entity #3 | Chains: C
LCMV peptidic epitope gp276 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LK2 2 B Beta-2-microglobulin SEQUENCE DATABASE RESIDUES 21-119, NUMBERED 1-99 10090
2 1KPU 2 B beta-2-microglobulin sequence database residues 21-119, numbered 1-99 10090
3 1G7P 2 B BETA-2 MICROGLOBULIN RESIDUES 21-119 10090
4 1G7Q 2 B BETA-2 MICROGLOBULIN RESIDUES 21-119 10090
5 1KPV 2 B beta-2-microglobulin sequence database residues 21-119, numbered 1-99 10090
6 1FZK 2 B PROTEIN (BETA-2-MICROGLOBULIN) 10090
7 1FZO 2 B PROTEIN (BETA-2-MICROGLOBULIN) 10090
8 1LEG 2 B BETA-2-MICROGLOBULIN SEQUENCE DATABASE RESIDUES 21-119, NUMBERED 1-99 10090
9 6GB6 2 B, E Beta-2-microglobulin 10090
10 1FZM 2 B PROTEIN (BETA-2-MICROGLOBULIN) 10090
11 2ZSV 2 B, D Beta-2-microglobulin 10090
12 4L8D 2 B, D Beta-2-microglobulin UNP residues 21-119 10090
13 6I8C 1 A Beta-2-microglobulin 10090
14 3WS6 2 C, D Beta-2-microglobulin 10090
15 3PWU 2 B Beta-2-microglobulin murine beta2m 10090
16 1T0N 2 B, E Beta-2-microglobulin 10090
17 4PV9 2 B, D Beta-2-microglobulin 10090
18 3VJ6 2 B Beta-2-microglobulin 10090
19 1WBX 2 B BETA-2MICROGLOBULIN 10090
20 1FZJ 2 B BETA-2-MICROGLOBULIN 10090
21 1S7Q 2 B Beta-2-microglobulin 10090
22 2CLZ 2 B, P BETA-2 MICROGLOBULIN 10090
23 3P9M 2 B, E Beta-2-microglobulin 10090
24 2CLV 2 B, P BETA-2 MICROGLOBULIN 10090
25 3P9L 2 B, E Beta-2-microglobulin 10090
26 1S7S 2 B Beta-2-microglobulin 10090
27 4PGE 2 B Beta-2-microglobulin UNP residues 21-119 10090
28 1RJY 2 B, E Beta-2-microglobulin 10090
29 1JUF 2 B Beta-2-microglobulin 10090
30 3CC5 2 B, E Beta-2-microglobulin 10090
31 3QUL 2 B, E, H, K Beta-2-microglobulin UNP Residues 21-119 10090
32 1WBZ 2 B, D BETA-2MICROGLOBULIN 10090
33 4HS3 2 B Beta-2-microglobulin UNP residues 21-119 10090
34 1MHC 2 B, E MHC CLASS I ANTIGEN H2-M3 10090
35 5E8O 3 B, E Beta-2-microglobulin 10090
36 5E8P 2 B, E Beta-2-microglobulin 10090
37 3FON 2 B, D Beta-2-microglobulin IgC 10090
38 3ROO 2 B, D Beta-2-microglobulin unp residues 21-119 10090
39 1RK1 2 B Beta-2-microglobulin 10090
40 1T0M 2 B, E Beta-2-microglobulin 10090
41 2ZOK 2 B, D, F, H Beta-2-microglobulin 10090
42 2VAA 2 B BETA-2 MICROGLOBULIN 10090
43 4PV8 2 B, D Beta-2-microglobulin 10090
44 1NEZ 2 B Beta-2-microglobulin 10090
45 1LEK 2 B Beta-2-microglobulin SEQUENCE DATABASE RESIDUES 21-119, NUMBERED 1-99 10090
46 3PAB 2 B, E Beta-2-microglobulin 10090
47 3FOM 2 B Beta-2-microglobulin IgC 10090
48 3TBV 2 B, D, F, H Beta-2-microglobulin RESIDUES 21-119 10090
49 1JPF 2 B BETA-2-MICROGLOBULIN 10090
50 1YN6 2 B Beta-2-microglobulin 10090
51 1INQ 2 B BETA-2 MICROGLOBULIN 10090
52 2VAB 2 B BETA-2 MICROGLOBULIN 10090
53 1VAD 2 B BETA-2 MICROGLOBULIN 10090
54 1S7U 2 B, E, H, K Beta-2-microglobulin 10090
55 1YN7 2 B Beta-2-microglobulin 10090
56 6GB5 2 B, D Beta-2-microglobulin 10090
57 4ZUV 2 B, E Beta-2-microglobulin 10090
58 1PQZ 2 B Beta-2-microglobulin Mature Beta-2-Microglobulin 10090
59 1LD9 2 B, E BETA-2 MICROGLOBULIN 10090
60 1KBG 2 L PROTEIN (BETA-2-MICROGLOBULIN) FORMS HETERODIMER WITH CHAIN H, AND THEN A TRIMOLECULAR COMPLEX WITH CHAIN P MHC ASSOCIATED LIGHT CHAIN 10090
61 3TBW 2 B, D, F, H Beta-2-microglobulin RESIDUES 21-119 10090
62 3P4O 2 B, E Beta-2-microglobulin 10090
63 1S7T 2 B, E Beta-2-microglobulin 10090
64 1OSZ 2 B BETA-2 MICROGLOBULIN 10090
65 1VAC 2 B BETA-2 MICROGLOBULIN 10090
66 1S7V 2 B, E Beta-2-microglobulin 10090
67 1JPG 2 B BETA-2-MICROGLOBULIN 10090
68 6GB7 2 B, D, H Beta-2-microglobulin 10090
69 6GB7 3 F Beta-2-microglobulin 10090
70 4ZUU 2 B Beta-2-microglobulin UNP residues 21-119 10090
71 1KJ3 3 L, M BETA-2 MICROGLOBULIN 10090
72 4PGC 2 B, E Beta-2-microglobulin UNP residues 21-119 10090
73 1HOC 2 B BETA 2-MICROGLOBULIN 10090
74 5JWD 2 B Beta-2-microglobulin 10090
75 6H6D 2 B, E Beta-2-microglobulin 10090
76 1S7W 2 B, E, H, K Beta-2-microglobulin 10090
77 2MHA 2 B, D BETA 2-MICROGLOBULIN 10090
78 5JWE 2 B, D, F, H Beta-2-microglobulin 10090
79 6H6H 2 B, E Beta-2-microglobulin 10090
80 1S7X 2 B, E, H, K Beta-2-microglobulin 10090
81 1K8D 2 B BETA-2-MICROGLOBULIN 10090
82 3P4M 2 B, E Beta-2-microglobulin 10090
83 3WS3 2 B, D Beta-2-microglobulin 10090
84 1NAN 2 I, P Beta-2-microglobulin 10090
85 4PG9 2 B Beta-2-microglobulin UNP residues 21-119 10090
86 3FOL 2 B Beta-2-microglobulin IgC 10090
87 5E8N 2 B, E, H, K Beta-2-microglobulin 10090
88 3CH1 2 B, E, H, K Beta-2-microglobulin 10090
89 1WBY 2 B BETA-2MICROGLOBULIN 10090
90 3TBT 2 B, E, H, K Beta-2-microglobulin RESIDUES 21-119 10090
91 5MZM 2 B, E Beta-2-microglobulin 10090
92 1ZT1 2 B Beta-2-microglobulin 10090
93 1RK0 2 B Beta-2-microglobulin 10090
94 1CD1 2 B, D CD1 ALPHA1, ALPHA2, ALPHA3, BETA2-MICROGLOBULIN 10090
95 1FO0 2 L PROTEIN (BETA-2 MICROGLOBULIN) 10090
96 2FO4 2 B Beta-2-microglobulin 10090
97 3CPL 2 B, D Beta-2-microglobulin 10090
98 3QUK 2 B, E Beta-2-microglobulin UNP Residues 21-119 10090
99 4ZUW 2 B Beta-2-microglobulin UNP resides 21-119 10090
100 4ZUS 2 B Beta-2-microglobulin UNP residues 21-119 10090
101 3TBS 2 B, E Beta-2-microglobulin UNP RESIDUES 21-119 10090
102 4NSK 2 B Beta-2-microglobulin 10090
103 4ZUT 2 B Beta-2-microglobulin UNP residues 21-119 10090
104 4PGD 2 B Beta-2-microglobulin UNP residues 21-119 10090
105 3FTG 2 B Beta-2-microglobulin 10090
106 1RJZ 2 B, E Beta-2-microglobulin 10090
107 3P4N 2 B, E Beta-2-microglobulin 10090
108 1KJ2 3 L, M Beta-2 microglobulin 10090
109 1BQH 2 B, E PROTEIN (BETA-2-MICROGLOBULIN ) BETA CHAIN 10090
110 1ZHB 2 B, E, H, K Beta-2-microglobulin 10090
111 3L3H 2 B Beta-2-microglobulin 10090
112 2ZSW 2 B, D, F, H Beta-2-microglobulin 10090
113 3CCH 2 B, E, H, K Beta-2-microglobulin 10090
114 3RGV 4 D Beta-2-microglobulin Residues 21-119 10090
115 3BUY 2 B Beta-2-microglobulin 10090
116 3ROL 2 B, D Beta-2-microglobulin unp residues 21-119 10090
117 1ZHN 2 B beta-2-microglobulin 10090
118 6G9R 2 B, D, F, H Beta-2-microglobulin UNP residues 21-119 10090
119 1FFP 2 B, E BETA-2 MICROGLOBULIN BETA CHAIN BETA-2 MICROGLOBULIN 10090
120 1NAM 5 L Beta-2-microglobulin 10090
121 2FWO 2 B Beta-2-microglobulin 10090
122 1FFO 2 B, E BETA-2 MICROGLOBULIN BETA CHAIN BETA-2 MICROGLOBULIN 10090
123 1MWA 4 L, M MICROGLOBULIN MHC LIGHT CHAIN 10090
124 5TIL 2 B, E Beta-2-microglobulin 10090
125 1FFN 2 B, E BETA-2 MICROGLOBULIN, BETA CHAIN BETA-2 MICROGLOBULIN 10090
126 1FG2 2 B, E, H, K BETA-2 MICROGLOBULIN 10090
127 3CVH 2 B, N Beta-2-microglobulin 10090
128 2OL3 4 L Beta-2-microglobulin 10090
129 2ZOL 2 B, D Beta-2-microglobulin 10090
130 3TBY 2 B, E, H, K Beta-2-microglobulin RESIDUES 21-119 10090
131 2CKB 5 L, M BETA-2 MICROGLOBULIN 10090
132 1N59 2 B, D Beta-2-microglobulin 10090
133 4IHO 2 B, E Beta-2-microglobulin 10090
134 1LDP 2 L MHC CLASS I H-2LD ASPARAGINE LINKED N-ACETYL-GLUCOSAMINE CARBOHYDRATES AT CHAIN H, N86 AND N176 CHAIN H IS THE HEAVY CHAIN, PEPTIDE BINDING DOMAIN, CHAIN L IS THE LIGHT CHAIN OR BETA-2-MICROGLOBULIN 10090
135 1ZT7 2 B, D Beta-2-microglobulin 10090
136 4PGB 2 B, E Beta-2-microglobulin UNP residues 21-119 10090
137 1N5A 2 B, E, H, K Beta-2-microglobulin 10090
138 1S7R 2 B, E Beta-2-microglobulin 10090
139 1BZ9 2 B PROTEIN (CLASS I HISTOCOMPATIBILITY ANTIGEN) 10090
140 1N3N 2 B, D, F, H BETA-2-MICROGLOBULIN 10090
141 5TJE 2 B, D Beta-2-microglobulin 10090
142 3PQY 2 B, G, L, Q Beta-2-microglobulin 10090
143 1G6R 4 L, M BETA-2 MICROGLOBULIN NON-COVALENTLY ASSOCIATED WITH ENTITY 3 10090
144 1P1Z 2 B Beta-2-microglobulin 10090