Sequence Similarity Clusters for the Entities in PDB 1JOP

Entity #1 | Chains: A,B,C,D
Yhch protein protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10400
95 % 2 2 10643 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 2 10520
70 % 2 2 10155
50 % 2 2 9359
40 % 2 2 8901
30 % 2 2 8259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1S4C 1 A, B, C, D Protein HI0227 727
2 1JOP 1 A, B, C, D Yhch protein 727