Sequence Similarity Clusters for the Entities in PDB 1JOP

Entity #1 | Chains: A,B,C,D
Yhch protein protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10705
95 % 2 2 11085 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 2 10554
70 % 2 2 10188
50 % 2 2 9421
40 % 2 2 8971
30 % 2 2 8312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1S4C 1 A, B, C, D Protein HI0227 727
2 1JOP 1 A, B, C, D Yhch protein 727