Sequence Similarity Clusters for the Entities in PDB 1JNY

Entity #1 | Chains: A,B
Elongation factor 1-alpha protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22008
95 % 2 2 21392 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.6
PDBFlex
90 % 2 2 20828
70 % 2 7 6261
50 % 5 18 2911
40 % 5 18 2910
30 % 13 110 429

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures