Sequence Similarity Clusters for the Entities in PDB 1JKM

Entity #1 | Chains: A,B
BREFELDIN A ESTERASE protein, length: 361 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52548
95 % 1 1 36113 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 32117
70 % 1 1 30881
50 % 1 1 25192
40 % 6 10 2159
30 % 6 10 2180

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures