Sequence Similarity Clusters for the Entities in PDB 1JII

Entity #1 | Chains: A
tyrosyl-tRNA synthetase protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 20509
95 % 4 4 19235 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 4 4 18650
70 % 4 4 17470
50 % 13 13 4548
40 % 14 14 3641
30 % 19 19 2501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures