1JCK

T-CELL RECEPTOR BETA CHAIN COMPLEXED WITH SEC3 SUPERANTIGEN


Sequence Similarity Clusters for the Entities in PDB 1JCK

Entity #1 | Chains: A,C
14.3.D T CELL ANTIGEN RECEPTOR protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9775
95 % 10 11 4067
90 % 21 22 1921
70 % 407 423 27
50 % 423 439 57
40 % 423 439 77
30 % 423 439 82
Entity #2 | Chains: B,D
STAPHYLOCOCCAL ENTEROTOXIN C3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32952
95 % 29 29 1812
90 % 29 29 1853
70 % 29 29 1904
50 % 49 49 964
40 % 58 60 610
30 % 87 90 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1BEC 1 A 14.3.D T CELL ANTIGEN RECEPTOR 10090
2 5M02 4 H T-cell receptor beta chain V region C5,T-cell receptor beta-2 chain C region 10090
3 2Q86 2 B, D Vbeta8.2 extracellular domain 10090
4 6G9Q 4 H T-cell receptor beta chain V region C5,T-cell receptor beta-1 chain C region UNP residues 11-122,UNP residues 1-127 10090
5 5M01 4 H T-cell receptor beta chain V region C5,T-cell receptor beta-2 chain C region 10090
6 5M00 4 H T-cell receptor beta chain V region C5,Uncharacterized protein 10090
7 1LP9 5 F, M T-cell Receptor beta chain 10090
8 1TCR 2 B ALPHA, BETA T-CELL RECEPTOR (VB8.2DB2JB2.4CB2\;VA3JA58CA) 10090
9 1SBB 1 A, C PROTEIN (14.3.D T CELL ANTIGEN RECEPTOR) BETA CHAIN 10090
10 1L0Y 1 A, C 14.3.d T cell receptor beta chain 10090
11 2UWE 5 F, M AHIII TCR BETA CHAIN 10090
12 2JCC 5 F, M TCR BETA 10090
13 1MWA 2 B, D 2C T CELL RECEPTOR BETA CHAIN 10090
14 5TIL 5 H, L Beta chain of murine T cell receptor P14 10090
15 1L0X 1 A, C 14.3.d T cell receptor beta chain 10090
16 2CKB 2 B, D ALPHA, BETA T CELL RECEPTOR VB8.2DB2JB2.4CB2\;VA3JA58CA EXTRACELLULAR DOMAINS 10090
17 3MBE 5 D, H TCR 21.3 beta chain 10090
18 5TJE 4 F, H BETA CHAIN OF MURINE T CELL RECEPTOR p14 10090
19 2J8U 5 F, M AHIII TCR BETA CHAIN ECTODOMAIN 10090
20 1G6R 2 B, D BETA T CELL RECEPTOR EXTRACELLULAR DOMAIN 10090
21 1JCK 1 A, C 14.3.D T CELL ANTIGEN RECEPTOR BETA CHAIN 10090
22 3C6L 2 B, F TCR 2W20 beta chain 10090