1JCK

T-CELL RECEPTOR BETA CHAIN COMPLEXED WITH SEC3 SUPERANTIGEN


Sequence Similarity Clusters for the Entities in PDB 1JCK

Entity #1 | Chains: A,C
14.3.D T CELL ANTIGEN RECEPTOR protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9430
95 % 10 11 4012
90 % 21 22 1910
70 % 400 416 28
50 % 416 432 59
40 % 416 432 77
30 % 416 432 80
Entity #2 | Chains: B,D
STAPHYLOCOCCAL ENTEROTOXIN C3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32620
95 % 29 29 1798
90 % 29 29 1829
70 % 29 29 1873
50 % 49 49 945
40 % 58 60 604
30 % 87 90 452

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures