Sequence Similarity Clusters for the Entities in PDB 1JCF

Entity #1 | Chains: A
ROD SHAPE-DETERMINING PROTEIN MREB protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 18464
95 % 1 4 17827 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 4 17267
70 % 1 4 16098
50 % 8 13 5022
40 % 8 13 4781
30 % 8 13 4620

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures