Sequence Similarity Clusters for the Entities in PDB 1JBB

Entity #1 | Chains: A,B
ubiquitin conjugating enzyme E2-17.5 KDA protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 30819
95 % 3 5 15245 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 3 5 15010
70 % 3 5 14159
50 % 12 36 874
40 % 40 112 353
30 % 63 176 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures