Sequence Similarity Clusters for the Entities in PDB 1J0D

Entity #1 | Chains: A,B,C,D
1-aminocyclopropane-1-carboxylate deaminase protein, length: 341 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11442
95 % 2 4 5019 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 4 5093
70 % 2 4 5037
50 % 7 10 1814
40 % 7 10 1856
30 % 15 23 612

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures