Sequence Similarity Clusters for the Entities in PDB 1IVE

Entity #1 | Chains: A,B
INFLUENZA A SUBTYPE N2 NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 3713
95 % 17 17 2047 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 19 19 1647
70 % 27 31 995
50 % 107 119 333
40 % 145 172 180
30 % 148 178 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures