Sequence Similarity Clusters for the Entities in PDB 1ICT

Entity #1 | Chains: A,B,C,D,E,F,G,H
TRANSTHYRETIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 159 160 84
95 % 297 302 12 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 302 307 14
70 % 286 291 24
50 % 297 302 42
40 % 297 302 51
30 % 297 302 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures