1IC5

CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD99A)-HEN LYSOZYME COMPLEX


Sequence Similarity Clusters for the Entities in PDB 1IC5

Entity #1 | Chains: L
LYSOZYME BINDING IG KAPPA CHAIN protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 14 5040
95 % 16 22 2978
90 % 16 24 2769
70 % 19 29 2160
50 % 141 413 20
40 % 154 438 23
30 % 465 1353 5
Entity #2 | Chains: H
IGG1 FAB CHAIN H protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73002
95 % 16 22 2979
90 % 16 22 3056
70 % 19 42 1181
50 % 320 901 4
40 % 320 918 5
30 % 466 1353 5
Entity #3 | Chains: Y
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 658 787 3
95 % 711 843 5
90 % 722 860 6
70 % 728 867 11
50 % 940 1095 8
40 % 962 1130 9
30 % 962 1132 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3ZZL 1 A, B, C TRANSCRIPTION ATTENUATION PROTEIN MTRB POLYPEPTIDE INCLUDING RESIDUE 7-76 86665
2 1WAP 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V TRP RNA-BINDING ATTENUATION PROTEIN 1423
3 1GTF 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) TWO PROTEIN 11-MERS (CHAINS A TO K AND L TO V), RESIDUES 1 - 75 IN EACH CHAIN (SOME N- AND C-TERMINAL RESIDUES MISSING DUE TO DISORDER) 1422
4 2EXT 1 A, B, C Transcription attenuation protein mtrB 1422
5 2ZCZ 1 A, B, C, D, E, F Transcription attenuation protein mtrB 1422
6 4V4F 2 AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN, BO, BP, BQ, BR, BS, BT, BU, BV TRANSCRIPTION ATTENUATION PROTEIN MTRB TWO PROTEIN 11MERS (CHAINS A-K AND L-V) 1422
7 5EEU 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB 1422
8 1UTD 2 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V TRANSCRIPTION ATTENUATION PROTEIN MTRB TWO PROTEIN 11MERS (CHAINS A-K AND L-V) 1422
9 1C9S 2 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V TRP RNA-BINDING ATTENUATION PROTEIN 1422
10 5EEW 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) 1422
11 5EEV 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB 1422
12 2EXS 1 A, B, C Transcription attenuation protein mtrB 1422
13 5EEX 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) 1422
14 5EEY 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) 1422
15 5EEZ 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) 1422
16 5EF0 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB 1422
17 5EF1 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB 1422
18 5EF2 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB 1422
19 5EF3 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein MtrB 1422
20 2ZD0 1 A, B, C Transcription attenuation protein mtrB 1422
21 1QAW 1 A, B, C, D, E, F, G, H, I, J, K TRP RNA-BINDING ATTENUATION PROTEIN 1422
22 1GTN 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V TRP RNA-BINDING ATTENUATION PROTEIN THE STRUCTURE CONTAINS 2 11-MER MOLECULES (CHAINS A TO K AND L TO V), (RESIDUES 1-75) (SOME N- AND C-TERMINAL RESIDUES MISSING DUE TO DISORDER) 1422
23 4B27 1 A, B, C, D, E, F TRANSCRIPTION ATTENUATION PROTEIN MTRB 1423
24 3ZTE 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V TRYPTOPHAN OPERON RNA-BINDING ATTENUATION PROTEIN (TRAP) 22 L-TRYPTOPHAN MOLECULES ARE BOUND (ONE LIGAND PER SUBUNIT) 1402
25 2ZP8 1 A, B, C, D Transcription attenuation protein mtrB 1422
26 3AQD 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V Transcription attenuation protein mtrB 1422
27 2ZP9 1 A, B, F, G, K, L Transcription attenuation protein mtrB 1422
28 6RVV 1 AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, EK, FA, FB, FC, FD, FE, FF, FG, FH, FI, FJ, FK, GA, GB, GC, GD, GE, GF, GG, GH, GI, GJ, GK, HA, HB, HC, HD, HE, HF, HG, HH, HI, HJ, HK, IA, IB, IC, ID, IE, IF, IG, IH, II, IJ, IK, JA, JB, JC, JD, JE, JF, JG, JH, JI, JJ, JK, KA, KB, KC, KD, KE, KF, KG, KH, KI, KJ, KK, LA, LB, LC, LD, LE, LF, LG, LH, LI, LJ, LK, MA, MB, MC, MD, ME, MF, MG, MH, MI, MJ, MK, NA, NB, NC, ND, NE, NF, NG, NH, NI, NJ, NK, OA, OB, OC, OD, OE, OF, OG, OH, OI, OJ, OK, PA, PB, PC, PD, PE, PF, PG, PH, PI, PJ, PK, QA, QB, QC, QD, QE, QF, QG, QH, QI, QJ, QK, RA, RB, RC, RD, RE, RF, RG, RH, RI, RJ, RK, SA, SB, SC, SD, SE, SF, SG, SH, SI, SJ, SK, TA, TB, TC, TD, TE, TF, TG, TH, TI, TJ, TK, UA, UB, UC, UD, UE, UF, UG, UH, UI, UJ, UK, VA, VB, VC, VD, VE, VF, VG, VH, VI, VJ, VK, WA, WB, WC, WD, WE, WF, WG, WH, WI, WJ, WK, XA, XB, XC, XD, XE, XF, XG, XH, XI, XJ, XK Transcription attenuation protein MtrB 1422
29 6RVW 1 AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, EK, FA, FB, FC, FD, FE, FF, FG, FH, FI, FJ, FK, GA, GB, GC, GD, GE, GF, GG, GH, GI, GJ, GK, HA, HB, HC, HD, HE, HF, HG, HH, HI, HJ, HK, IA, IB, IC, ID, IE, IF, IG, IH, II, IJ, IK, JA, JB, JC, JD, JE, JF, JG, JH, JI, JJ, JK, KA, KB, KC, KD, KE, KF, KG, KH, KI, KJ, KK, LA, LB, LC, LD, LE, LF, LG, LH, LI, LJ, LK, MA, MB, MC, MD, ME, MF, MG, MH, MI, MJ, MK, NA, NB, NC, ND, NE, NF, NG, NH, NI, NJ, NK, OA, OB, OC, OD, OE, OF, OG, OH, OI, OJ, OK, PA, PB, PC, PD, PE, PF, PG, PH, PI, PJ, PK, QA, QB, QC, QD, QE, QF, QG, QH, QI, QJ, QK, RA, RB, RC, RD, RE, RF, RG, RH, RI, RJ, RK, SA, SB, SC, SD, SE, SF, SG, SH, SI, SJ, SK, TA, TB, TC, TD, TE, TF, TG, TH, TI, TJ, TK, UA, UB, UC, UD, UE, UF, UG, UH, UI, UJ, UK, VA, VB, VC, VD, VE, VF, VG, VH, VI, VJ, VK, WA, WB, WC, WD, WE, WF, WG, WH, WI, WJ, WK, XA, XB, XC, XD, XE, XF, XG, XH, XI, XJ, XK Transcription attenuation protein MtrB 1422