Sequence Similarity Clusters for the Entities in PDB 1HJP

Entity #1 | Chains: A
RUVA protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15688
95 % 2 4 12431 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 2 4 12513
70 % 2 4 11877
50 % 2 4 10887
40 % 2 4 10254
30 % 3 9 2839

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1CUK 1 A RUVA PROTEIN 562 3.6.4.12 | Details
2 1HJP 1 A RUVA 562 3.6.4.12 | Details
3 1C7Y 9 A HOLLIDAY JUNCTION DNA HELICASE RUVA 562 3.6.4.12 | Details
4 1BDX 2 A, B, C, D HOLLIDAY JUNCTION DNA HELICASE RUVA 562 3.6.4.12 | Details