Sequence Similarity Clusters for the Entities in PDB 1HDJ

Entity #1 | Chains: A
HUMAN HSP40 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49892
95 % 1 1 41261
90 % 1 1 39275
70 % 1 1 43964
50 % 1 1 29451
40 % 2 2 23728
30 % 2 2 19776

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures