Sequence Similarity Clusters for the Entities in PDB 1HCM

Entity #1 | Chains: A,B
CYTOCHROME CD1 NITRITE REDUCTASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 4707
95 % 13 13 2653 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 2.8
PDBFlex
90 % 13 13 2715
70 % 13 13 2746
50 % 14 23 1530
40 % 14 23 1576
30 % 14 23 1604

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures