Sequence Similarity Clusters for the Entities in PDB 1FZK

Entity #1 | Chains: A
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36506
95 % 7 66 502 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 7 66 534
70 % 148 816 6
50 % 148 821 8
40 % 152 865 9
30 % 152 889 12
Entity #2 | Chains: B
PROTEIN (BETA-2-MICROGLOBULIN) protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 144 110
95 % 15 273 68 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 15 273 74
70 % 179 1070 4
50 % 183 1094 4
40 % 183 1094 4
30 % 183 1094 7
Entity #3 | Chains: P
PROTEIN (NUCLEOCAPSID PROTEIN) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures