Sequence Similarity Clusters for the Entities in PDB 1FYX

Entity #1 | Chains: A
TOLL-LIKE RECEPTOR 2 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 75835
95 % 1 3 12411 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.6
PDBFlex
90 % 1 3 12221
70 % 1 3 11626
50 % 1 3 10626
40 % 1 3 10000
30 % 1 3 9253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FYX 1 A TOLL-LIKE RECEPTOR 2 TIR DOMAIN 9606
2 1FYW 1 A TOLL-LIKE RECEPTOR 2 TIR DOMAIN 9606
3 1O77 1 A, B, C, D, E TOLL-LIKE RECEPTOR 2 TIR DOMAIN, RESIDUES 639-784 9606